Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | SAMN05421740_101558 | Not Available | Positive | 675077 - 675673 | 22191.6 |
| hypothetical protein | SAMN05421740_101559 | Not Available | Positive | 675683 - 676639 | 35274.9 |
| uncharacterized membrane protein yckc, rdd family | SAMN05421740_101560 | Not Available | Positive | 676644 - 677261 | 22435.9 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05421740_101561 | Not Available | Positive | 677310 - 679313 | 73903.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421740_101562 | Not Available | Negative | 679323 - 679823 | 18184.9 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05421740_101563 | Not Available | Negative | 680084 - 681817 | 63785.0 |
| hypothetical protein | SAMN05421740_101564 | Not Available | Negative | 681893 - 682567 | 26715.8 |
| hypothetical protein | SAMN05421740_101565 | Not Available | Negative | 682530 - 682658 | 4841.04 |
| tyrosyl-trna synthetase | SAMN05421740_101566 | Not Available | Positive | 682690 - 683973 | 48174.5 |
| protein of unknown function | SAMN05421740_101567 | Not Available | Negative | 684078 - 684815 | 27033.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
