Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05421740_101548 | Not Available | Negative | 659094 - 660329 | 45656.8 |
| cold-shock dna-binding protein family | SAMN05421740_101549 | Not Available | Negative | 660399 - 660590 | 6896.39 |
| uncharacterized conserved protein yfas, alpha-2-macroglobulin family | SAMN05421740_101550 | Not Available | Positive | 660883 - 667035 | 231735.0 |
| topoisomerase-4 subunit b | SAMN05421740_101551 | Not Available | Positive | 667139 - 669004 | 70232.8 |
| formyltetrahydrofolate deformylase | SAMN05421740_101552 | Not Available | Positive | 669012 - 669854 | 31184.9 |
| hypothetical protein | SAMN05421740_101553 | Not Available | Positive | 669939 - 671750 | 68335.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421740_101554 | Not Available | Negative | 671753 - 672682 | 35276.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05421740_101555 | Not Available | Negative | 672692 - 673444 | 28259.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05421740_101556 | Not Available | Negative | 673467 - 674201 | 25940.6 |
| hypothetical protein | SAMN05421740_101557 | Not Available | Positive | 674346 - 675065 | 25873.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
