Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101528 | Not Available | Positive | 634446 - 635183 | 28251.9 |
| dihydrodipicolinate reductase | SAMN05421740_101529 | Not Available | Positive | 635252 - 636001 | 27534.6 |
| signal peptidase i | SAMN05421740_101530 | Not Available | Positive | 636040 - 637464 | 54688.4 |
| pyridoxine 5'-phosphate synthase | SAMN05421740_101531 | Not Available | Negative | 637457 - 638176 | 26509.4 |
| tigr00159 family protein | SAMN05421740_101532 | Not Available | Positive | 638224 - 639006 | 29351.9 |
| protein of unknown function | SAMN05421740_101533 | Not Available | Negative | 639062 - 639910 | 31283.1 |
| glucose/galactose transporter | SAMN05421740_101534 | Not Available | Negative | 640135 - 641433 | 46205.5 |
| dinb superfamily protein | SAMN05421740_101535 | Not Available | Negative | 641891 - 642403 | 19699.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421740_101536 | Not Available | Negative | 642384 - 643676 | 48959.1 |
| glutamyl-trna synthetase | SAMN05421740_101537 | Not Available | Positive | 643727 - 645259 | 58301.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
