Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | SAMN05421740_101508 | Not Available | Positive | 616598 - 617530 | 34028.7 |
| acyl-coa hydrolase | SAMN05421740_101509 | Not Available | Positive | 617546 - 618070 | 19644.8 |
| hypothetical protein | SAMN05421740_101510 | Not Available | Negative | 618096 - 618308 | 7664.66 |
| protein of unknown function | SAMN05421740_101511 | Not Available | Negative | 618354 - 619313 | 34213.6 |
| predicted rna-binding protein, contains pua-like domain | SAMN05421740_101512 | Not Available | Negative | 619348 - 619755 | 15702.9 |
| gliding motility-associated protein gldc | SAMN05421740_101513 | Not Available | Negative | 619758 - 620156 | 15302.2 |
| hypothetical protein | SAMN05421740_101514 | Not Available | Negative | 620146 - 620394 | 9508.35 |
| atp-dependent rna helicase rhle | SAMN05421740_101515 | Not Available | Negative | 620391 - 621743 | 50334.2 |
| hypothetical protein | SAMN05421740_101516 | Not Available | Negative | 621798 - 622148 | 13718.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421740_101517 | Not Available | Positive | 622265 - 623452 | 44413.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
