Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101488 | Not Available | Negative | 591958 - 592197 | 9207.89 |
| uncharacterized iron-regulated membrane protein | SAMN05421740_101489 | Not Available | Negative | 592194 - 593528 | 49693.1 |
| iron complex outermembrane recepter protein | SAMN05421740_101490 | Not Available | Negative | 593535 - 596024 | 91928.2 |
| arac-type dna-binding protein | SAMN05421740_101491 | Not Available | Positive | 596157 - 597101 | 35180.1 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05421740_101492 | Not Available | Negative | 597110 - 597757 | 23575.6 |
| 2-dehydro-3-deoxygluconokinase | SAMN05421740_101493 | Not Available | Negative | 597887 - 598879 | 36283.0 |
| methionine-gamma-lyase | SAMN05421740_101494 | Not Available | Negative | 598964 - 600148 | 42857.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421740_101495 | Not Available | Positive | 600602 - 601111 | 18770.4 |
| 2'-5' rna ligase | SAMN05421740_101496 | Not Available | Positive | 601198 - 601812 | 23838.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101497 | Not Available | Negative | 601815 - 602402 | 23155.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
