Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | SAMN05421740_10138 | Not Available | Negative | 36334 - 37680 | 52536.6 |
| apolipoprotein d and lipocalin family protein | SAMN05421740_10139 | Not Available | Negative | 37680 - 38219 | 20578.3 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05421740_10140 | Not Available | Positive | 38520 - 39068 | 19861.5 |
| hypothetical protein | SAMN05421740_10141 | Not Available | Negative | 39167 - 41740 | 95716.2 |
| hypothetical protein | SAMN05421740_10142 | Not Available | Positive | 41759 - 41908 | 5724.24 |
| hypothetical protein | SAMN05421740_10143 | Not Available | Negative | 41920 - 42051 | 5114.25 |
| protein of unknown function | SAMN05421740_10144 | Not Available | Negative | 42074 - 42382 | 11243.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_10145 | Not Available | Positive | 42492 - 43121 | 24276.2 |
| fecr family protein | SAMN05421740_10146 | Not Available | Positive | 43187 - 44395 | 43796.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_10147 | Not Available | Positive | 44583 - 48071 | 127712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
