Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized iron-regulated membrane protein | SAMN05421740_1223 | Not Available | Negative | 5529090 - 5530229 | 43183.5 |
| tonb-dependent siderophore receptor | SAMN05421740_1224 | Not Available | Negative | 5530233 - 5532839 | 95756.3 |
| fecr family protein | SAMN05421740_1225 | Not Available | Negative | 5532936 - 5533919 | 37522.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_1226 | Not Available | Negative | 5533962 - 5534507 | 20822.7 |
| hypothetical protein | SAMN05421740_1227 | Not Available | Positive | 5535279 - 5536640 | 49919.1 |
| hypothetical protein | SAMN05421740_1228 | Not Available | Positive | 5536651 - 5536791 | 5325.72 |
| Trna-ile | Not Available | Not Available | Positive | 5538915 - 5538988 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5538997 - 5539073 | Not Available |
| hypothetical protein | SAMN05421740_1241 | Not Available | Positive | 5542385 - 5542469 | 3291.96 |
| yhch/yjgk/yial family protein | SAMN05421740_1242 | Not Available | Positive | 5542510 - 5543133 | 23590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
