Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421740_1216 | Not Available | Negative | 5520043 - 5520783 | 26270.9 |
| two component regulator propeller | SAMN05421740_1217 | Not Available | Negative | 5520875 - 5522023 | 43250.6 |
| transcriptional regulatory protein, c terminal | SAMN05421740_1218 | Not Available | Positive | 5522107 - 5522997 | 33377.6 |
| dna helicase, putative | SAMN05421740_1219 | Not Available | Negative | 5523038 - 5525056 | 75424.3 |
| hypothetical protein | SAMN05421740_12110 | Not Available | Negative | 5525007 - 5525132 | 4723.84 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421740_12111 | Not Available | Negative | 5525216 - 5526298 | 40857.9 |
| hypothetical protein | SAMN05421740_12112 | Not Available | Positive | 5526434 - 5526556 | 4951.06 |
| hypothetical protein | SAMN05421740_12113 | Not Available | Negative | 5527240 - 5527807 | 22656.4 |
| hypothetical protein | SAMN05421740_1221 | Not Available | Positive | 5527808 - 5527930 | 4965.87 |
| atp-dependent dna helicase recg | SAMN05421740_1222 | Not Available | Negative | 5528109 - 5529038 | 35108.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
