Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | SAMN05421740_1205 | Not Available | Positive | 5509408 - 5512905 | 128451.0 |
| hypothetical protein | SAMN05421740_1206 | Not Available | Positive | 5512911 - 5513249 | 12464.9 |
| hypothetical protein | SAMN05421740_1207 | Not Available | Positive | 5513254 - 5513571 | 12280.0 |
| hypothetical protein | SAMN05421740_1208 | Not Available | Positive | 5514412 - 5515164 | 27593.1 |
| hypothetical protein | SAMN05421740_1209 | Not Available | Positive | 5515161 - 5516065 | 32951.4 |
| hypothetical protein | SAMN05421740_1211 | Not Available | Negative | 5516160 - 5517041 | 34415.2 |
| hypothetical protein | SAMN05421740_1212 | Not Available | Negative | 5517077 - 5517940 | 33875.3 |
| mfs transporter, fhs family, l-fucose permease | SAMN05421740_1213 | Not Available | Negative | 5517957 - 5519237 | 46681.0 |
| helix-turn-helix domain-containing protein | SAMN05421740_1214 | Not Available | Negative | 5519389 - 5519871 | 18661.3 |
| hypothetical protein | SAMN05421740_1215 | Not Available | Negative | 5519834 - 5520022 | 7144.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
