Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN05421740_1183 | Not Available | Positive | 5476407 - 5476772 | 13685.7 |
| hypothetical protein | SAMN05421740_1184 | Not Available | Negative | 5476800 - 5477171 | 13599.0 |
| hypothetical protein | SAMN05421740_1185 | Not Available | Negative | 5477178 - 5477324 | 5821.25 |
| hypothetical protein | SAMN05421740_1186 | Not Available | Negative | 5477321 - 5477797 | 17897.2 |
| hypothetical protein | SAMN05421740_1187 | Not Available | Negative | 5478583 - 5478735 | 5926.36 |
| hypothetical protein | SAMN05421740_1188 | Not Available | Negative | 5478746 - 5479192 | 16881.0 |
| virulence protein rhum family protein | SAMN05421740_1189 | Not Available | Negative | 5479251 - 5479691 | 17436.8 |
| predicted protein tyrosine phosphatase | SAMN05421740_11810 | Not Available | Negative | 5479849 - 5480208 | 14113.1 |
| hypothetical protein | SAMN05421740_11811 | Not Available | Negative | 5480178 - 5480660 | 18123.9 |
| hypothetical protein | SAMN05421740_11812 | Not Available | Negative | 5480733 - 5481680 | 36329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
