Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_1174 | Not Available | Positive | 5458572 - 5459156 | 22497.8 |
| fecr family protein | SAMN05421740_1175 | Not Available | Positive | 5459186 - 5460394 | 45737.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_1176 | Not Available | Positive | 5460597 - 5463977 | 125320.0 |
| starch-binding associating with outer membrane | SAMN05421740_1177 | Not Available | Positive | 5464061 - 5465491 | 53668.1 |
| hypothetical protein | SAMN05421740_1178 | Not Available | Positive | 5465540 - 5467732 | 84437.2 |
| hypothetical protein | SAMN05421740_1179 | Not Available | Positive | 5467747 - 5469909 | 82831.2 |
| hypothetical protein | SAMN05421740_11710 | Not Available | Positive | 5469945 - 5472563 | 99417.4 |
| malate synthase | SAMN05421740_11711 | Not Available | Positive | 5472574 - 5474020 | 53031.1 |
| sugar phosphate permease | SAMN05421740_1181 | Not Available | Negative | 5474152 - 5475495 | 50009.3 |
| fmn-dependent nadh-azoreductase | SAMN05421740_1182 | Not Available | Negative | 5475696 - 5476304 | 22311.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
