Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_11615 | Not Available | Negative | 5443533 - 5444138 | 23623.3 |
| fecr family protein | SAMN05421740_11616 | Not Available | Positive | 5444181 - 5445440 | 46726.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_11617 | Not Available | Positive | 5445652 - 5449071 | 124332.0 |
| ragb/susd domain-containing protein | SAMN05421740_11618 | Not Available | Positive | 5449093 - 5450541 | 54741.8 |
| alpha-1,2-mannosidase, putative | SAMN05421740_11619 | Not Available | Positive | 5450554 - 5452845 | 86212.3 |
| alpha-1,2-mannosidase, putative | SAMN05421740_11620 | Not Available | Positive | 5452862 - 5455135 | 85638.7 |
| lactate permease | SAMN05421740_11621 | Not Available | Positive | 5455186 - 5455877 | 24105.3 |
| lactate permease | SAMN05421740_1171 | Not Available | Positive | 5455878 - 5456390 | 17345.4 |
| 2-hydroxy-3-oxopropionate reductase | SAMN05421740_1172 | Not Available | Positive | 5456415 - 5457305 | 30769.6 |
| glycerate kinase | SAMN05421740_1173 | Not Available | Positive | 5457318 - 5458481 | 40712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
