Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 43 | SAMN05421740_101468 | Not Available | Negative | 560578 - 561576 | 38000.2 |
| protein of unknown function | SAMN05421740_101469 | Not Available | Negative | 561736 - 562476 | 27645.7 |
| starch-binding associating with outer membrane | SAMN05421740_101470 | Not Available | Negative | 562499 - 564433 | 73842.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101471 | Not Available | Negative | 564438 - 567545 | 115625.0 |
| hypothetical protein | SAMN05421740_101472 | Not Available | Negative | 567487 - 567702 | 8185.68 |
| hypothetical protein | SAMN05421740_101473 | Not Available | Negative | 567754 - 568200 | 15623.4 |
| repeat domain-containing protein | SAMN05421740_101474 | Not Available | Negative | 568584 - 570530 | 70803.3 |
| xylose isomerase-like tim barrel | SAMN05421740_101475 | Not Available | Negative | 570540 - 571454 | 34775.7 |
| quinoprotein glucose dehydrogenase | SAMN05421740_101476 | Not Available | Negative | 571487 - 573745 | 82097.6 |
| sugar phosphate permease | SAMN05421740_101477 | Not Available | Negative | 574026 - 575264 | 45392.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
