Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_11564 | Not Available | Negative | 5416845 - 5417141 | 11279.3 |
| mn-containing catalase | SAMN05421740_11565 | Not Available | Positive | 5417457 - 5418413 | 35171.9 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05421740_11566 | Not Available | Negative | 5418482 - 5419429 | 35474.8 |
| alpha/beta hydrolase family protein | SAMN05421740_11567 | Not Available | Negative | 5419442 - 5420170 | 27440.2 |
| smr domain-containing protein | SAMN05421740_11568 | Not Available | Positive | 5420370 - 5420660 | 10989.2 |
| predicted o-methyltransferase yrrm | SAMN05421740_11569 | Not Available | Negative | 5420616 - 5421320 | 26072.9 |
| lactate permease | SAMN05421740_1161 | Not Available | Positive | 5421360 - 5421857 | 16906.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_1162 | Not Available | Positive | 5422006 - 5422596 | 22977.9 |
| fecr family protein | SAMN05421740_1163 | Not Available | Positive | 5422700 - 5423833 | 42510.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_1164 | Not Available | Positive | 5424011 - 5427442 | 125515.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
