Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf433 family | SAMN05421740_11554 | Not Available | Negative | 5403990 - 5404217 | 8352.23 |
| hypothetical protein | SAMN05421740_11555 | Not Available | Positive | 5405095 - 5405982 | 32238.1 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05421740_11556 | Not Available | Positive | 5406340 - 5406843 | 19058.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_11557 | Not Available | Positive | 5407311 - 5410376 | 111425.0 |
| hypothetical protein | SAMN05421740_11558 | Not Available | Positive | 5410387 - 5411925 | 56723.5 |
| hypothetical protein | SAMN05421740_11559 | Not Available | Positive | 5412344 - 5413204 | 31916.3 |
| predicted dehydrogenase | SAMN05421740_11560 | Not Available | Positive | 5413208 - 5414575 | 51278.5 |
| dihydrofolate reductase | SAMN05421740_11561 | Not Available | Negative | 5414625 - 5415188 | 20883.9 |
| protein of unknown function | SAMN05421740_11562 | Not Available | Negative | 5415307 - 5416044 | 28142.2 |
| satd family (satd) | SAMN05421740_11563 | Not Available | Negative | 5416041 - 5416640 | 21815.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
