Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_11544 | Not Available | Positive | 5393221 - 5394177 | 35054.1 |
| hypothetical protein | SAMN05421740_11545 | Not Available | Positive | 5394216 - 5395088 | 32864.8 |
| yd repeat-containing protein | SAMN05421740_11546 | Not Available | Positive | 5395105 - 5398206 | 115166.0 |
| rhs repeat-associated core domain-containing protein | SAMN05421740_11547 | Not Available | Positive | 5398217 - 5401828 | 132385.0 |
| protein of unknown function | SAMN05421740_11548 | Not Available | Positive | 5401833 - 5402222 | 14719.5 |
| hypothetical protein | SAMN05421740_11549 | Not Available | Positive | 5402243 - 5402647 | 14232.0 |
| protein of unknown function | SAMN05421740_11550 | Not Available | Positive | 5402647 - 5402952 | 11835.0 |
| hypothetical protein | SAMN05421740_11551 | Not Available | Negative | 5403011 - 5403247 | 8727.54 |
| hypothetical protein | SAMN05421740_11552 | Not Available | Negative | 5403266 - 5403484 | 8228.87 |
| predicted nuclease, contains pin domain, potential toxin-antitoxin system component | SAMN05421740_11553 | Not Available | Negative | 5403653 - 5403988 | 12699.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
