Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad dependent oxidoreductase tigr03364 | SAMN05421740_101448 | Not Available | Negative | 531454 - 532584 | 41392.6 |
| hypothetical protein | SAMN05421740_101449 | Not Available | Negative | 532581 - 533906 | 49540.9 |
| phosphonatase-like hydrolase | SAMN05421740_101450 | Not Available | Negative | 533911 - 534600 | 25747.7 |
| 4-aminobutyrate aminotransferase | SAMN05421740_101451 | Not Available | Negative | 534624 - 535997 | 50604.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421740_101452 | Not Available | Negative | 535997 - 537895 | 72384.4 |
| starch-binding associating with outer membrane | SAMN05421740_101453 | Not Available | Negative | 537914 - 539377 | 54034.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101454 | Not Available | Negative | 539405 - 542737 | 121701.0 |
| 4-aminobutyrate aminotransferase apoenzyme | SAMN05421740_101455 | Not Available | Negative | 542873 - 544243 | 49883.0 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421740_101456 | Not Available | Negative | 544354 - 544926 | 21980.6 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05421740_101457 | Not Available | Positive | 545069 - 548455 | 123987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
