Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05421740_101438 | Not Available | Negative | 519598 - 520584 | 37974.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101439 | Not Available | Negative | 520669 - 521268 | 23602.7 |
| mrna interferase higb | SAMN05421740_101440 | Not Available | Positive | 521462 - 521779 | 12447.9 |
| hth-type transcriptional regulator / antitoxin higa | SAMN05421740_101441 | Not Available | Positive | 521757 - 522044 | 11086.2 |
| hypothetical protein | SAMN05421740_101442 | Not Available | Positive | 522215 - 522454 | 9320.16 |
| starch-binding associating with outer membrane | SAMN05421740_101443 | Not Available | Negative | 522432 - 523997 | 58823.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101444 | Not Available | Negative | 524019 - 527132 | 113862.0 |
| fecr family protein | SAMN05421740_101445 | Not Available | Negative | 527168 - 528235 | 39718.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101446 | Not Available | Negative | 528314 - 528919 | 23513.4 |
| phospholipase c | SAMN05421740_101447 | Not Available | Negative | 529007 - 531442 | 90907.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
