Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-associated phospholipid phosphatase | SAMN05421740_101428 | Not Available | Negative | 504667 - 505407 | 27896.0 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421740_101429 | Not Available | Negative | 505500 - 505829 | 12554.0 |
| tonb-dependent receptor plug domain | SAMN05421740_101430 | Not Available | Negative | 505949 - 508705 | 100207.0 |
| hypothetical protein | SAMN05421740_101431 | Not Available | Positive | 508758 - 508862 | 4090.97 |
| calcineurin-like phosphoesterase | SAMN05421740_101432 | Not Available | Negative | 508814 - 510601 | 67397.4 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421740_101433 | Not Available | Negative | 510609 - 511460 | 31881.4 |
| calcineurin-like phosphoesterase | SAMN05421740_101434 | Not Available | Negative | 511468 - 512700 | 46476.5 |
| phopq-activated pathogenicity-related protein | SAMN05421740_101435 | Not Available | Negative | 512726 - 514099 | 51281.2 |
| starch-binding associating with outer membrane | SAMN05421740_101436 | Not Available | Negative | 514120 - 515790 | 61673.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101437 | Not Available | Negative | 515803 - 519486 | 135241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
