Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101418 | Not Available | Negative | 492232 - 492864 | 24695.0 |
| hypothetical protein | SAMN05421740_101419 | Not Available | Negative | 492843 - 492956 | 4200.34 |
| fecr family protein | SAMN05421740_101420 | Not Available | Positive | 492994 - 494001 | 37517.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101421 | Not Available | Positive | 494175 - 497582 | 126653.0 |
| starch-binding associating with outer membrane | SAMN05421740_101422 | Not Available | Positive | 497593 - 499098 | 56764.8 |
| calcineurin-like phosphoesterase | SAMN05421740_101423 | Not Available | Positive | 499085 - 500053 | 36952.4 |
| exonuclease iii | SAMN05421740_101424 | Not Available | Positive | 500064 - 500942 | 33365.7 |
| calcineurin-like phosphoesterase | SAMN05421740_101425 | Not Available | Positive | 500952 - 501926 | 37025.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101426 | Not Available | Negative | 501957 - 502556 | 23054.0 |
| putative hemolysin | SAMN05421740_101427 | Not Available | Negative | 502802 - 504562 | 67119.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
