Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101408 | Not Available | Negative | 475398 - 475766 | 14470.7 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05421740_101409 | Not Available | Negative | 475901 - 477610 | 61781.4 |
| starch-binding associating with outer membrane | SAMN05421740_101410 | Not Available | Negative | 477655 - 479115 | 54423.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101411 | Not Available | Negative | 479137 - 482523 | 124951.0 |
| fecr family protein | SAMN05421740_101412 | Not Available | Negative | 482636 - 483601 | 36568.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101413 | Not Available | Negative | 483728 - 484309 | 22889.5 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421740_101414 | Not Available | Negative | 484459 - 486039 | 59647.1 |
| starch-binding associating with outer membrane | SAMN05421740_101415 | Not Available | Negative | 486066 - 487586 | 56501.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101416 | Not Available | Negative | 487606 - 490929 | 123347.0 |
| fecr family protein | SAMN05421740_101417 | Not Available | Negative | 491144 - 492112 | 36393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
