Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421740_101398 | Not Available | Negative | 460027 - 461748 | 64675.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101399 | Not Available | Negative | 461767 - 465441 | 135730.0 |
| fecr family protein | SAMN05421740_101400 | Not Available | Negative | 465608 - 466570 | 35808.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101401 | Not Available | Negative | 466642 - 467250 | 23457.3 |
| hypothetical protein | SAMN05421740_101402 | Not Available | Negative | 467378 - 468316 | 34619.1 |
| starch-binding associating with outer membrane | SAMN05421740_101403 | Not Available | Negative | 468376 - 469932 | 59427.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101404 | Not Available | Negative | 469946 - 473293 | 123783.0 |
| fecr family protein | SAMN05421740_101405 | Not Available | Negative | 473471 - 474454 | 37225.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101406 | Not Available | Negative | 474529 - 475143 | 23621.7 |
| hypothetical protein | SAMN05421740_101407 | Not Available | Negative | 475183 - 475401 | 8040.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
