Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101388 | Not Available | Negative | 447617 - 448231 | 23876.7 |
| calcineurin-like phosphoesterase | SAMN05421740_101389 | Not Available | Negative | 448358 - 449257 | 33961.3 |
| starch-binding associating with outer membrane | SAMN05421740_101390 | Not Available | Negative | 449270 - 450958 | 64419.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101391 | Not Available | Negative | 450969 - 454223 | 120141.0 |
| fecr family protein | SAMN05421740_101392 | Not Available | Negative | 454391 - 455365 | 36157.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101393 | Not Available | Negative | 455423 - 456037 | 24287.2 |
| predicted nuclease of the rnase h fold, hicb family | SAMN05421740_101394 | Not Available | Negative | 456086 - 456472 | 14223.8 |
| hypothetical protein | SAMN05421740_101395 | Not Available | Negative | 456469 - 456648 | 6740.31 |
| purple acid phosphatase, n-terminal domain | SAMN05421740_101396 | Not Available | Negative | 456798 - 457976 | 44090.5 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421740_101397 | Not Available | Negative | 458190 - 459989 | 67879.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
