Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein | SAMN05421740_10128 | Not Available | Positive | 27277 - 27615 | 12843.1 |
| hypothetical protein | SAMN05421740_10129 | Not Available | Positive | 27771 - 27893 | 4534.92 |
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN05421740_10130 | Not Available | Negative | 27991 - 29013 | 37879.8 |
| hypothetical protein | SAMN05421740_10131 | Not Available | Positive | 29058 - 29291 | 8437.43 |
| short chain dehydrogenase | SAMN05421740_10132 | Not Available | Negative | 29309 - 29527 | 7848.46 |
| hypothetical protein | SAMN05421740_10133 | Not Available | Negative | 29755 - 30282 | 19373.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421740_10134 | Not Available | Positive | 30457 - 31644 | 43203.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421740_10135 | Not Available | Positive | 31733 - 32299 | 22453.5 |
| hypothetical protein | SAMN05421740_10136 | Not Available | Positive | 32299 - 33054 | 28652.3 |
| tetratricopeptide repeat-containing protein | SAMN05421740_10137 | Not Available | Positive | 33058 - 36282 | 122477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
