Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101378 | Not Available | Positive | 429547 - 430875 | 48986.9 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421740_101379 | Not Available | Negative | 431142 - 432293 | 43236.1 |
| starch-binding associating with outer membrane | SAMN05421740_101380 | Not Available | Negative | 432388 - 433980 | 59838.4 |
| iron complex outermembrane recepter protein | SAMN05421740_101381 | Not Available | Negative | 434005 - 436986 | 109748.0 |
| fecr family protein | SAMN05421740_101382 | Not Available | Negative | 437077 - 438123 | 39818.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101383 | Not Available | Negative | 438181 - 438705 | 20409.7 |
| starch-binding associating with outer membrane | SAMN05421740_101384 | Not Available | Negative | 438835 - 440298 | 55077.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101385 | Not Available | Negative | 440317 - 443895 | 130713.0 |
| phospholipase c | SAMN05421740_101386 | Not Available | Negative | 444027 - 446540 | 95432.9 |
| fecr family protein | SAMN05421740_101387 | Not Available | Negative | 446599 - 447558 | 35620.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
