Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate, water dikinase | SAMN05421740_101368 | Not Available | Positive | 415730 - 418357 | 97041.4 |
| cold-shock dna-binding protein family | SAMN05421740_101369 | Not Available | Positive | 418509 - 418700 | 6870.21 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421740_101370 | Not Available | Positive | 418824 - 419216 | 14839.8 |
| cold-shock dna-binding protein family | SAMN05421740_101371 | Not Available | Positive | 419410 - 419871 | 17112.2 |
| hypothetical protein | SAMN05421740_101372 | Not Available | Negative | 419907 - 420890 | 36831.4 |
| calcineurin-like phosphoesterase | SAMN05421740_101373 | Not Available | Negative | 421001 - 422578 | 59102.2 |
| hypothetical protein | SAMN05421740_101374 | Not Available | Positive | 422868 - 423236 | 14049.3 |
| hypothetical protein | SAMN05421740_101375 | Not Available | Positive | 423394 - 425928 | 96469.3 |
| nadh-ubiquinone oxidoreductase (complex i), chain 5 n-terminus | SAMN05421740_101376 | Not Available | Positive | 425944 - 427800 | 70547.8 |
| sulfate permease, mfs superfamily | SAMN05421740_101377 | Not Available | Positive | 427843 - 429441 | 56833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
