Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain-containing protein | SAMN05421740_101358 | Not Available | Negative | 403494 - 404312 | 31814.6 |
| hypothetical protein | SAMN05421740_101359 | Not Available | Negative | 404319 - 404975 | 26078.2 |
| putative auto-transporter adhesin, head gin domain | SAMN05421740_101360 | Not Available | Negative | 404988 - 405641 | 24598.3 |
| hypothetical protein | SAMN05421740_101361 | Not Available | Negative | 405652 - 406119 | 18984.0 |
| helix-turn-helix domain-containing protein | SAMN05421740_101362 | Not Available | Positive | 406345 - 406704 | 13779.4 |
| type i restriction enzyme m protein | SAMN05421740_101363 | Not Available | Positive | 406783 - 408807 | 77681.1 |
| type i restriction enzyme, s subunit | SAMN05421740_101364 | Not Available | Positive | 408801 - 410357 | 59112.9 |
| pectate lyase superfamily protein | SAMN05421740_101365 | Not Available | Positive | 411045 - 413984 | 106562.0 |
| ankyrin repeat-containing protein | SAMN05421740_101366 | Not Available | Positive | 414147 - 415091 | 35634.8 |
| transcriptional regulator, marr family | SAMN05421740_101367 | Not Available | Positive | 415278 - 415733 | 17155.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
