Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101348 | Not Available | Negative | 395306 - 395518 | 8067.53 |
| hypothetical protein | SAMN05421740_101349 | Not Available | Negative | 395594 - 396718 | 43747.1 |
| hypothetical protein | SAMN05421740_101350 | Not Available | Positive | 396955 - 397233 | 10444.5 |
| site-specific recombinase xerd | SAMN05421740_101351 | Not Available | Positive | 397655 - 398872 | 45817.8 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421740_101352 | Not Available | Positive | 398963 - 399847 | 33900.5 |
| hypothetical protein | SAMN05421740_101353 | Not Available | Negative | 400097 - 401080 | 37483.6 |
| hypothetical protein | SAMN05421740_101354 | Not Available | Negative | 401089 - 401643 | 21078.9 |
| hypothetical protein | SAMN05421740_101355 | Not Available | Negative | 401636 - 401959 | 12479.0 |
| helix-turn-helix domain-containing protein | SAMN05421740_101356 | Not Available | Negative | 401952 - 402227 | 10604.9 |
| hypothetical protein | SAMN05421740_101357 | Not Available | Negative | 402633 - 403379 | 29155.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
