Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101338 | Not Available | Negative | 386350 - 387069 | 28481.2 |
| hypothetical protein | SAMN05421740_101339 | Not Available | Negative | 387165 - 388037 | 33455.4 |
| hypothetical protein | SAMN05421740_101340 | Not Available | Negative | 388452 - 389015 | 21425.3 |
| hypothetical protein | SAMN05421740_101341 | Not Available | Negative | 389008 - 389658 | 24771.3 |
| type iv secretory system conjugative dna transfer | SAMN05421740_101342 | Not Available | Negative | 389761 - 391893 | 80001.4 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421740_101343 | Not Available | Negative | 391911 - 393209 | 48795.7 |
| hypothetical protein | SAMN05421740_101344 | Not Available | Negative | 393191 - 393601 | 15896.3 |
| hypothetical protein | SAMN05421740_101345 | Not Available | Negative | 393782 - 393961 | 6963.4 |
| hypothetical protein | SAMN05421740_101346 | Not Available | Negative | 394070 - 394741 | 26232.4 |
| hypothetical protein | SAMN05421740_101347 | Not Available | Positive | 394869 - 395198 | 12539.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
