Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101328 | Not Available | Positive | 379796 - 380050 | 9869.73 |
| hypothetical protein | SAMN05421740_101329 | Not Available | Negative | 380058 - 380336 | 10531.8 |
| putative sos response-associated peptidase yedk | SAMN05421740_101330 | Not Available | Negative | 380342 - 381046 | 27310.0 |
| dna polymerase v | SAMN05421740_101331 | Not Available | Negative | 381057 - 382322 | 47767.8 |
| sos response umud protein. serine peptidase. merops family s24 | SAMN05421740_101332 | Not Available | Negative | 382285 - 382752 | 17799.2 |
| hypothetical protein | SAMN05421740_101333 | Not Available | Positive | 382829 - 383116 | 10546.7 |
| hypothetical protein | SAMN05421740_101334 | Not Available | Negative | 383126 - 383398 | 10818.2 |
| dna-binding transcriptional regulator, acrr family | SAMN05421740_101335 | Not Available | Negative | 383403 - 384158 | 29270.9 |
| glycine c-acetyltransferase | SAMN05421740_101336 | Not Available | Negative | 384163 - 385437 | 46849.1 |
| hypothetical protein | SAMN05421740_101337 | Not Available | Negative | 385590 - 386270 | 26597.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
