Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101318 | Not Available | Negative | 374505 - 374780 | 10184.4 |
| hypothetical protein | SAMN05421740_101319 | Not Available | Negative | 374849 - 375097 | 9244.23 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05421740_101320 | Not Available | Positive | 375499 - 375918 | 15872.2 |
| hypothetical protein | SAMN05421740_101321 | Not Available | Positive | 375915 - 376337 | 15781.9 |
| hypothetical protein | SAMN05421740_101322 | Not Available | Negative | 376533 - 376760 | 9019.71 |
| hypothetical protein | SAMN05421740_101323 | Not Available | Negative | 376866 - 377603 | 28688.8 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421740_101324 | Not Available | Negative | 377778 - 378662 | 34442.6 |
| hypothetical protein | SAMN05421740_101325 | Not Available | Negative | 378709 - 379035 | 12630.8 |
| hypothetical protein | SAMN05421740_101326 | Not Available | Negative | 379227 - 379436 | 7972.58 |
| hypothetical protein | SAMN05421740_101327 | Not Available | Positive | 379521 - 379790 | 10343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
