Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein 26 | SAMN05421740_10118 | Not Available | Positive | 17037 - 17543 | 19572.0 |
| probable dna metabolism protein | SAMN05421740_10119 | Not Available | Negative | 17581 - 18366 | 30665.8 |
| putative dna modification/repair radical sam protein | SAMN05421740_10120 | Not Available | Negative | 18368 - 19618 | 47284.3 |
| hypothetical protein | SAMN05421740_10121 | Not Available | Negative | 19894 - 22215 | 86151.3 |
| hypothetical protein | SAMN05421740_10122 | Not Available | Negative | 22212 - 22760 | 21111.6 |
| papain-like cysteine protease avrrpt2 | SAMN05421740_10123 | Not Available | Negative | 22772 - 23323 | 19852.9 |
| hypothetical protein | SAMN05421740_10124 | Not Available | Negative | 23339 - 25369 | 76034.3 |
| hypothetical protein | SAMN05421740_10125 | Not Available | Positive | 25822 - 26019 | 6969.57 |
| transcriptional regulator, tetr family | SAMN05421740_10126 | Not Available | Positive | 26145 - 26735 | 22529.4 |
| hypothetical protein | SAMN05421740_10127 | Not Available | Positive | 26810 - 27274 | 17629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
