Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna synthetase | SAMN05421740_101278 | Not Available | Negative | 335265 - 337340 | 78645.1 |
| putative oxidoreductase | SAMN05421740_101279 | Not Available | Positive | 337463 - 337870 | 14205.0 |
| methyltransferase domain-containing protein | SAMN05421740_101280 | Not Available | Positive | 337881 - 338534 | 24261.2 |
| transcriptional regulator, tetr family | SAMN05421740_101281 | Not Available | Positive | 338631 - 339245 | 23824.8 |
| membrane fusion protein, multidrug efflux system | SAMN05421740_101282 | Not Available | Positive | 339426 - 340568 | 41427.4 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421740_101283 | Not Available | Positive | 340575 - 343793 | 117012.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421740_101284 | Not Available | Positive | 343795 - 345231 | 51969.3 |
| Trna-glu | Not Available | Not Available | Positive | 345352 - 345423 | Not Available |
| hypothetical protein | SAMN05421740_101286 | Not Available | Negative | 347041 - 347211 | 6605.01 |
| hypothetical protein | SAMN05421740_101287 | Not Available | Negative | 347503 - 347928 | 16440.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
