Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN05421740_101258 | Not Available | Negative | 311778 - 313910 | 79102.4 |
| hypothetical protein | SAMN05421740_101259 | Not Available | Negative | 314088 - 315260 | 43876.6 |
| putative atpase | SAMN05421740_101260 | Not Available | Positive | 315418 - 316698 | 47631.3 |
| glutamyl-trna synthetase | SAMN05421740_101261 | Not Available | Negative | 316695 - 317531 | 31685.2 |
| duf4097 and duf4098 domain-containing protein yvlb | SAMN05421740_101262 | Not Available | Positive | 317874 - 318851 | 33616.6 |
| acetyl esterase/lipase | SAMN05421740_101263 | Not Available | Negative | 318888 - 319799 | 32289.5 |
| alanine dehydrogenase | SAMN05421740_101264 | Not Available | Negative | 319818 - 321029 | 44097.7 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN05421740_101265 | Not Available | Positive | 321255 - 323180 | 72790.9 |
| tetratricopeptide repeat-containing protein | SAMN05421740_101266 | Not Available | Positive | 323253 - 323930 | 24949.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05421740_101267 | Not Available | Positive | 324029 - 324481 | 16030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
