Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase | SAMN05421740_101248 | Not Available | Negative | 299550 - 300491 | 36213.1 |
| hypothetical protein | SAMN05421740_101249 | Not Available | Negative | 300491 - 301375 | 33376.4 |
| moba-like ntp transferase domain-containing protein | SAMN05421740_101250 | Not Available | Negative | 301405 - 302109 | 25736.7 |
| carboxypepd_reg-like domain-containing protein | SAMN05421740_101251 | Not Available | Negative | 302132 - 304666 | 98106.1 |
| myo-inositol-1-phosphate synthase | SAMN05421740_101252 | Not Available | Negative | 304865 - 306199 | 49319.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421740_101253 | Not Available | Negative | 306227 - 307228 | 36489.1 |
| hypothetical protein | SAMN05421740_101254 | Not Available | Negative | 307225 - 308343 | 42649.9 |
| serine palmitoyltransferase | SAMN05421740_101255 | Not Available | Negative | 308343 - 309548 | 44063.9 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | SAMN05421740_101256 | Not Available | Negative | 310060 - 310557 | 17506.7 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421740_101257 | Not Available | Positive | 310731 - 311747 | 36644.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
