Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcineurin-like phosphoesterase | SAMN05421740_101238 | Not Available | Negative | 286773 - 290396 | 135382.0 |
| uncharacterized protein yjik | SAMN05421740_101239 | Not Available | Negative | 290396 - 291253 | 32206.1 |
| polyphosphate kinase | SAMN05421740_101240 | Not Available | Negative | 291250 - 293292 | 77777.9 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN05421740_101241 | Not Available | Negative | 293289 - 294503 | 46410.7 |
| arac-type dna-binding protein | SAMN05421740_101242 | Not Available | Negative | 294734 - 295693 | 36640.1 |
| fatty acid hydroxylase superfamily protein | SAMN05421740_101243 | Not Available | Negative | 295686 - 296324 | 24848.3 |
| protein of unknown function | SAMN05421740_101244 | Not Available | Negative | 296329 - 296886 | 21232.9 |
| sugar or nucleoside kinase, ribokinase family | SAMN05421740_101245 | Not Available | Negative | 296894 - 297790 | 32568.5 |
| putative hydrolase of the had superfamily | SAMN05421740_101246 | Not Available | Negative | 297774 - 298499 | 27113.7 |
| lysylphosphatidylglycerol synthase tm region | SAMN05421740_101247 | Not Available | Negative | 298496 - 299518 | 37286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
