Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101228 | Not Available | Negative | 275742 - 276461 | 28041.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421740_101229 | Not Available | Positive | 276603 - 277214 | 23032.5 |
| peptidase family m23 | SAMN05421740_101230 | Not Available | Positive | 277223 - 278923 | 64171.1 |
| peroxiredoxin q/bcp | SAMN05421740_101231 | Not Available | Positive | 278942 - 279406 | 17419.8 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN05421740_101232 | Not Available | Negative | 279407 - 280045 | 24802.1 |
| dctp deaminase | SAMN05421740_101233 | Not Available | Positive | 280148 - 280684 | 20237.3 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN05421740_101234 | Not Available | Negative | 280681 - 281616 | 35255.5 |
| glucose-6-phosphate isomerase | SAMN05421740_101235 | Not Available | Positive | 281855 - 283510 | 61821.3 |
| pap2 superfamily protein | SAMN05421740_101236 | Not Available | Positive | 283518 - 284405 | 32324.0 |
| hypothetical protein | SAMN05421740_101237 | Not Available | Negative | 284417 - 286756 | 89664.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
