Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05421740_101218 | Not Available | Positive | 256901 - 260323 | 125653.0 |
| starch-binding associating with outer membrane | SAMN05421740_101219 | Not Available | Positive | 260337 - 262022 | 64143.3 |
| thioredoxin 1 | SAMN05421740_101220 | Not Available | Positive | 262400 - 262636 | 8980.91 |
| protein involved in ribonucleotide reduction | SAMN05421740_101221 | Not Available | Positive | 262735 - 263148 | 15502.3 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05421740_101222 | Not Available | Positive | 263105 - 265210 | 80403.1 |
| ribonucleoside-diphosphate reductase beta chain | SAMN05421740_101223 | Not Available | Positive | 265318 - 266301 | 37775.3 |
| iron complex outermembrane recepter protein | SAMN05421740_101224 | Not Available | Negative | 266351 - 268759 | 88287.8 |
| predicted dehydrogenase | SAMN05421740_101225 | Not Available | Negative | 269028 - 270473 | 53085.3 |
| starch-binding associating with outer membrane | SAMN05421740_101226 | Not Available | Negative | 270616 - 272241 | 61229.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101227 | Not Available | Negative | 272254 - 275265 | 111043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
