Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate methyltransferase | SAMN05421740_101208 | Not Available | Positive | 246138 - 246923 | 29138.4 |
| acetolactate synthase, small subunit | SAMN05421740_101209 | Not Available | Positive | 246943 - 247533 | 22766.1 |
| dinb superfamily protein | SAMN05421740_101210 | Not Available | Positive | 247540 - 248016 | 17837.2 |
| ketol-acid reductoisomerase | SAMN05421740_101211 | Not Available | Positive | 248105 - 249163 | 38879.9 |
| 2-isopropylmalate synthase | SAMN05421740_101212 | Not Available | Positive | 249233 - 250741 | 55201.8 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05421740_101213 | Not Available | Positive | 250783 - 252180 | 50582.7 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN05421740_101214 | Not Available | Positive | 252185 - 252781 | 22290.3 |
| d-citramalate synthase | SAMN05421740_101215 | Not Available | Positive | 252784 - 254370 | 58522.3 |
| 3-isopropylmalate dehydrogenase | SAMN05421740_101216 | Not Available | Positive | 254416 - 255510 | 39305.1 |
| l-threonine ammonia-lyase | SAMN05421740_101217 | Not Available | Positive | 255507 - 256739 | 45151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
