Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parapedobacter koreensis strain Jip14
Accession NumberFNZR00000000.1
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_1018 | Not Available | - | 7456 - 7932 | 18172.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421740_1019 | Not Available | - | 7937 - 9310 | 50394.6 |
| hypothetical protein | SAMN05421740_10110 | Not Available | - | 9435 - 9713 | 10635.8 |
| cell wall-associated hydrolase, nlpc family | SAMN05421740_10111 | Not Available | + | 10189 - 10692 | 18163.0 |
| hypothetical protein | SAMN05421740_10112 | Not Available | + | 10925 - 11107 | 6617.21 |
| hypothetical protein | SAMN05421740_10113 | Not Available | + | 11324 - 12265 | 32261.1 |
| y_y_y domain-containing protein | SAMN05421740_10114 | Not Available | + | 12369 - 15365 | 115508.0 |
| two component transcriptional regulator, lyttr family | SAMN05421740_10115 | Not Available | + | 15355 - 16083 | 27885.8 |
| hypothetical protein | SAMN05421740_10116 | Not Available | - | 16107 - 16334 | 8304.19 |
| hypothetical protein | SAMN05421740_10117 | Not Available | + | 16806 - 16943 | 5221.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.