Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101168 | Not Available | Negative | 194801 - 195181 | 14924.7 |
| protein of unknown function (du1801) | SAMN05421740_101169 | Not Available | Negative | 195240 - 195668 | 16330.7 |
| hypothetical protein | SAMN05421740_101170 | Not Available | Positive | 195941 - 197977 | 76702.8 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN05421740_101171 | Not Available | Negative | 197980 - 198657 | 25824.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421740_101172 | Not Available | Negative | 198647 - 200029 | 52608.9 |
| nveala protein | SAMN05421740_101173 | Not Available | Positive | 200240 - 200455 | 7898.75 |
| tolb-like 6-blade propeller-like | SAMN05421740_101174 | Not Available | Positive | 200586 - 201506 | 35376.1 |
| hypothetical protein | SAMN05421740_101175 | Not Available | Positive | 201542 - 202096 | 21189.4 |
| nveala protein | SAMN05421740_101176 | Not Available | Positive | 202291 - 202533 | 8141.83 |
| tolb-like 6-blade propeller-like | SAMN05421740_101177 | Not Available | Positive | 202755 - 203789 | 38990.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
