Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-psicose/d-tagatose/l-ribulose 3-epimerase | SAMN05421740_101138 | Not Available | Negative | 165029 - 165880 | 30895.9 |
| trehalose utilisation | SAMN05421740_101139 | Not Available | Negative | 165903 - 166943 | 38242.4 |
| protein of unknown function | SAMN05421740_101140 | Not Available | Negative | 166984 - 168036 | 38037.2 |
| putative heme-binding domain-containing protein | SAMN05421740_101141 | Not Available | Negative | 168049 - 170748 | 100226.0 |
| hypothetical protein | SAMN05421740_101142 | Not Available | Negative | 170869 - 170994 | 4673.61 |
| hypothetical protein | SAMN05421740_101143 | Not Available | Negative | 170991 - 171494 | 18632.2 |
| alpha-l-rhamnosidase | SAMN05421740_101144 | Not Available | Negative | 171491 - 174124 | 99925.0 |
| l-arabinose isomerase | SAMN05421740_101145 | Not Available | Negative | 174133 - 175551 | 52200.6 |
| arac-like ligand binding domain-containing protein | SAMN05421740_101146 | Not Available | Positive | 175680 - 176579 | 34574.1 |
| protein of unknown function | SAMN05421740_101147 | Not Available | Negative | 176627 - 177649 | 39235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
