Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101128 | Not Available | Negative | 148856 - 149836 | 36536.5 |
| hypothetical protein | SAMN05421740_101129 | Not Available | Negative | 149842 - 150720 | 33086.6 |
| protein of unknown function | SAMN05421740_101130 | Not Available | Negative | 150740 - 151525 | 28928.1 |
| predicted dehydrogenase | SAMN05421740_101131 | Not Available | Negative | 151527 - 152678 | 42894.7 |
| xylose isomerase-like tim barrel | SAMN05421740_101132 | Not Available | Negative | 152709 - 153743 | 37686.5 |
| hypothetical protein | SAMN05421740_101133 | Not Available | Negative | 153783 - 155000 | 44823.3 |
| starch-binding associating with outer membrane | SAMN05421740_101134 | Not Available | Negative | 155078 - 156547 | 55210.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101135 | Not Available | Negative | 156615 - 159761 | 114755.0 |
| fucose permease | SAMN05421740_101136 | Not Available | Negative | 160025 - 161269 | 44508.6 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05421740_101137 | Not Available | Positive | 161778 - 164948 | 119469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
