Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421740_101118 | Not Available | Positive | 137763 - 138671 | 33630.4 |
| gliding motility-associated lipoprotein gldb | SAMN05421740_101119 | Not Available | Negative | 138731 - 139762 | 39803.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421740_101120 | Not Available | Positive | 139823 - 140539 | 27377.3 |
| nad+ synthase (glutamine-hydrolysing) | SAMN05421740_101121 | Not Available | Positive | 140573 - 142216 | 59728.8 |
| protein of unknown function | SAMN05421740_101122 | Not Available | Positive | 142303 - 142884 | 22233.4 |
| regulatory protein, gntr family | SAMN05421740_101123 | Not Available | Negative | 142881 - 143912 | 39400.8 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05421740_101124 | Not Available | Negative | 144161 - 145513 | 50895.0 |
| hypothetical protein | SAMN05421740_101125 | Not Available | Negative | 145510 - 146727 | 45995.7 |
| 3-dehydroquinate synthase | SAMN05421740_101126 | Not Available | Negative | 146732 - 147895 | 42521.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421740_101127 | Not Available | Negative | 147954 - 148847 | 31788.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
