Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN05421740_101108 | Not Available | Negative | 126862 - 128697 | 66882.0 |
| protein of unknown function | SAMN05421740_101109 | Not Available | Negative | 128809 - 130275 | 53760.4 |
| starch synthase | SAMN05421740_101110 | Not Available | Negative | 130323 - 131153 | 31341.2 |
| pantoate--beta-alanine ligase | SAMN05421740_101111 | Not Available | Positive | 131279 - 132145 | 32143.0 |
| l-aspartate 1-decarboxylase | SAMN05421740_101112 | Not Available | Positive | 132441 - 132788 | 12753.4 |
| hypothetical protein | SAMN05421740_101113 | Not Available | Positive | 132911 - 133273 | 13988.9 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421740_101114 | Not Available | Positive | 133432 - 135732 | 84923.8 |
| thioredoxin-related protein | SAMN05421740_101115 | Not Available | Positive | 135753 - 136265 | 19441.7 |
| cysteine-rich secretory protein family protein | SAMN05421740_101116 | Not Available | Positive | 136326 - 136901 | 20983.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421740_101117 | Not Available | Positive | 137075 - 137722 | 23870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
