Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05421740_10198 | Not Available | Positive | 114923 - 115411 | 17840.0 |
| ferric uptake regulator family protein | SAMN05421740_10199 | Not Available | Negative | 115370 - 115690 | 11790.4 |
| iron complex transport system substrate-binding protein | SAMN05421740_101100 | Not Available | Negative | 115822 - 116769 | 34497.2 |
| protein of unknown function | SAMN05421740_101101 | Not Available | Negative | 116781 - 118043 | 44976.2 |
| outer membrane cobalamin receptor protein | SAMN05421740_101102 | Not Available | Negative | 118069 - 120492 | 91697.4 |
| arac-type dna-binding protein | SAMN05421740_101103 | Not Available | Positive | 120634 - 121641 | 38415.7 |
| hypothetical protein | SAMN05421740_101104 | Not Available | Positive | 121628 - 121966 | 12711.2 |
| glutamyl peptidase. serine peptidase. merops family s09d | SAMN05421740_101105 | Not Available | Negative | 121963 - 124386 | 89389.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05421740_101106 | Not Available | Negative | 124526 - 125005 | 17266.2 |
| gliding motility-associated lipoprotein gldj | SAMN05421740_101107 | Not Available | Positive | 125193 - 126770 | 59520.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
