Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx-like family protein | SAMN05421740_102214 | Not Available | Negative | 1167636 - 1168010 | 13694.2 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05421740_102215 | Not Available | Negative | 1168038 - 1168247 | 7678.97 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05421740_102216 | Not Available | Positive | 1168384 - 1169361 | 36933.9 |
| hypothetical protein | SAMN05421740_102217 | Not Available | Negative | 1169470 - 1170447 | 36680.2 |
| phosphoesterase, mj0936 family | SAMN05421740_102218 | Not Available | Negative | 1170478 - 1171260 | 29357.1 |
| nitrilase | SAMN05421740_102219 | Not Available | Negative | 1171260 - 1172198 | 34438.2 |
| alpha-1,2-mannosidase, putative | SAMN05421740_102220 | Not Available | Positive | 1172377 - 1174677 | 85940.3 |
| uncharacterized protein, yigz family | SAMN05421740_102221 | Not Available | Negative | 1174684 - 1175301 | 23141.9 |
| hypothetical protein | SAMN05421740_102222 | Not Available | Negative | 1175298 - 1176161 | 31633.0 |
| valyl-trna synthetase | SAMN05421740_102223 | Not Available | Positive | 1176301 - 1178925 | 100006.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
