Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_102173 | Not Available | Positive | 1132629 - 1133066 | 17180.8 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421740_102174 | Not Available | Positive | 1133068 - 1134354 | 48198.0 |
| tram recognition site of trad and trag | SAMN05421740_102175 | Not Available | Positive | 1134506 - 1136503 | 75937.6 |
| transcriptional regulator, arsr family | SAMN05421740_102176 | Not Available | Positive | 1136580 - 1136888 | 11537.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421740_102177 | Not Available | Positive | 1137112 - 1137687 | 23242.1 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421740_102178 | Not Available | Positive | 1137756 - 1138208 | 16858.5 |
| rtec protein | SAMN05421740_102179 | Not Available | Positive | 1138499 - 1139335 | 33626.1 |
| hypothetical protein | SAMN05421740_102180 | Not Available | Positive | 1139416 - 1139538 | 4828.81 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421740_102181 | Not Available | Positive | 1139649 - 1140218 | 22016.3 |
| predicted oxidoreductase | SAMN05421740_102182 | Not Available | Positive | 1140299 - 1141270 | 35247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
