Flavobacterium terrigena strain DSM 17934

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium terrigena strain DSM 17934 is a Gram-negative, non-motile bacterium characterized by its rod shape. This strain is aerobic, indicating that it requires oxygen for its metabolic processes. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, suggesting its preference for moderate environmental conditions. The presence of true flagella in Flavobacterium terrigena strain DSM 17934, despite its non-motility, indicates that while it possesses the apparatus for movement, it does not utilize this feature for locomotion. This characteristic may reflect an ecological adaptation where the bacterium relies more on passive dispersal or interactions with its environment rather than active movement. With a single replicon in its genome, the strain has a streamlined genetic structure that may contribute to its adaptability in various ecological niches. The accession number for this strain is FNYA00000000.1, which provides a reference for its genetic data. The ecological insights into Flavobacterium terrigena strain DSM 17934 can be significant, especially in understanding its role in soil ecosystems. As a member of the Flavobacterium genus, it may participate in the decomposition of organic matter and nutrient cycling, contributing to soil health and fertility. Its aerobic nature suggests it plays a role in aerobic processes, potentially influencing the microbial community dynamics and the overall ecological balance in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium terrigena
Strainstrain DSM 17934

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium terrigena strain DSM 17934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium terrigena strain DSM 17934 genome assembly, contig:

Gene Summary

Adenine Count

1095158 bp

Thymine Count

1088462 bp

Guanine Count

486301 bp

Cytosine Count

501794 bp

Genome Length

3172415 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseSAMN05660918_0241Not AvailablePositive23897 - 2510245154.2
type i phosphodiesterase / nucleotide pyrophosphataseSAMN05660918_0242Not AvailableNegative25180 - 2678760712.1
protein-l-isoaspartate(d-aspartate) o-methyltransferaseSAMN05660918_0243Not AvailableNegative26806 - 2744723838.0
predicted dehydrogenaseSAMN05660918_0244Not AvailablePositive27533 - 2851336346.8
3-hydroxybutyryl-coa dehydrogenaseSAMN05660918_0245Not AvailablePositive28552 - 2944232115.5
uncharacterized conserved protein, duf1015 familySAMN05660918_0246Not AvailablePositive29507 - 3072447352.3
hypothetical proteinSAMN05660918_0247Not AvailablePositive30782 - 3155529765.2
hypothetical proteinSAMN05660918_0248Not AvailablePositive31576 - 3224425332.6
dna polymerase-3 subunit epsilonSAMN05660918_0249Not AvailablePositive32306 - 3366751912.4
trna dimethylallyltransferaseSAMN05660918_0250Not AvailablePositive33673 - 3459935887.8

Displaying genes 31 – 40 of 2870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.