Flavobacterium terrigena strain DSM 17934

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium terrigena strain DSM 17934 is a Gram-negative, non-motile bacterium characterized by its rod shape. This strain is aerobic, indicating that it requires oxygen for its metabolic processes. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, suggesting its preference for moderate environmental conditions. The presence of true flagella in Flavobacterium terrigena strain DSM 17934, despite its non-motility, indicates that while it possesses the apparatus for movement, it does not utilize this feature for locomotion. This characteristic may reflect an ecological adaptation where the bacterium relies more on passive dispersal or interactions with its environment rather than active movement. With a single replicon in its genome, the strain has a streamlined genetic structure that may contribute to its adaptability in various ecological niches. The accession number for this strain is FNYA00000000.1, which provides a reference for its genetic data. The ecological insights into Flavobacterium terrigena strain DSM 17934 can be significant, especially in understanding its role in soil ecosystems. As a member of the Flavobacterium genus, it may participate in the decomposition of organic matter and nutrient cycling, contributing to soil health and fertility. Its aerobic nature suggests it plays a role in aerobic processes, potentially influencing the microbial community dynamics and the overall ecological balance in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium terrigena
Strainstrain DSM 17934

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium terrigena strain DSM 17934
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium terrigena strain DSM 17934 genome assembly, contig:

Gene Summary

Adenine Count

1095158 bp

Thymine Count

1088462 bp

Guanine Count

486301 bp

Cytosine Count

501794 bp

Genome Length

3172415 bp

Protein-coding Genes

2827 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine/d-amino acid oxidaseSAMN05660918_1263Not AvailablePositive1143798 - 114485340405.4
protein of unknown functionSAMN05660918_1264Not AvailableNegative1144842 - 114523414778.5
atp-binding cassette, subfamily f, member 3SAMN05660918_1265Not AvailablePositive1145299 - 114720972920.8
peptidase s46SAMN05660918_1267Not AvailableNegative1147843 - 114999080414.0
por secretion system c-terminal sorting domain-containing proteinSAMN05660918_1268Not AvailableNegative1150190 - 115146446534.1
gtp-binding proteinSAMN05660918_1269Not AvailableNegative1151521 - 115252236694.0
putative hemolysinSAMN05660918_1270Not AvailableNegative1152786 - 115400945775.0
adenylate kinaseSAMN05660918_1271Not AvailableNegative1154092 - 115466421488.5
hypothetical proteinSAMN05660918_1272Not AvailablePositive1154745 - 115529621696.7
5-(carboxyamino)imidazole ribonucleotide synthaseSAMN05660918_1273Not AvailablePositive1155358 - 115656045139.1

Displaying genes 1031 – 1040 of 2870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.